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Wednesday, April 15, 2020
Covid death rates in Lombardy may have been trending down even before the lockdown
"As
the epidemic of Covid-19 severely hit countries outside of China
one-by-one, they have been taking increasingly harsh measures to enforce
extreme social distancing. Several countries (including Italy, France,
Spain, Belgium, Morocco) have gone so far as to put their whole
populations under complete lockdown, where people are only allowed to
leave their homes if absolutely necessary.
I
will make no secret of the fact that I strongly disagree with the
lockdowns both from the purely moral standpoint and from my belief that
they are ultimately bound that they are going to cause a lot more deaths
than they may possibly spare in addition to the already severe
restrictions such as closing of schools and all the non-essential
venues.
But
here I would like to address one of the key factors that moved many
governments to turn to such unimaginable measures. I am talking to
epidemiological models of Covid-19 caused by SARS-CoV-2. Most people
believe that epidemiological models are at their core about biology, in
this case, viral biology. But this is only partly true.
What
is known about SARS-CoV-2 is important. It causes a disease with a
relatively long incubation period (median 6 days) to which few people
are probably immune, which is asymptomatic or only mildly symptomatic in
the vast majority of carriers but causes severe pneumonia and sometimes
deaths in some patients. The category most at risk from the virus are
older people with underlying pathologies. The virus seems to spread the
easiest (perhaps, overwhelmingly) through.
Equally
important, however, is the social aspect of epidemiology. It is how
people tend to interact and with whom that will determine the course of a
given epidemic.
Epidemiological
models on which the harsh measures and much of the panic around
Covid-19 are based seem to assume a constant average rate of
transmission without external intervention. Here is a relevant quote
from the Imperial College of London’s model paper:
“Based
on fits to the early growth-rate of the epidemic in Wuhan, we make a
baseline assumption that R0=2.4 but examine values between 2.0 and 2.6.”
By “early phase here, they seem to mean the phase of the Wuhan epidemic
in which there was no intervention.
The
assumption of a constant average rate of transmission is highly
implausible, however. As Stanford biophysicist Michael Levitt tells us:
“In
exponential growth models, you assume that new people can be infected
every day, because you keep meeting new people. But, if you consider
your own social circle, you basically meet the same people every day.
You can meet new people on public transportation, for example; but even
on the bus, after some time most passengers will either be infected or
immune.”
To
which I would add that with the virus that spreads like SARS-CoV-2 what
matters the most are prolonged close contacts between individuals,
especially in confined spaces. It is not just that I am unlikely to
constantly have such interactions with new people but also the people
who I tend to closely interact with will tend to have overlapping
circles of close interaction.
The Lombardy data and the rate of unchecked transmission
But
theory is theory, can we look at some data? To judge the development of
the epidemic, many people look at confirmed cases but there is a major
reason why it is probably a poor indicator. Not just because almost
everywhere the vast majority of cases goes unnoticed but also because
different countries or even different regions within one country have
different criteria for testing.
While
almost all countries initially try to test as many people connected to
the confirmed cases as possible, most don’t stick to this strategy for
long. With multiplying cases, they may only test only people with
underlying conditions or mostly medical personnel. But some countries
like South Korea and Iceland (and probably also Germany, Singapore) test
massively. With such a variety of approaches, it is probably better to
largely ignore the ongoing case counts in severely hit countries.
The
one indicator that is much more reliable, however, is the number of
deaths. While we do not know what the real fatality rate of the virus
is, given that the virus has not mutated significantly, it probably has
similar impacts on large human populations. That said, some countries
may, in theory, have significantly higher or lower fatality rates,
although so far, this remains unproven. For instance, in Italy, there
may be too many deaths because of how concentrated in the Lombardy
region the outbreak is, and what pressure it put on the ICU units there
and how many doctors it initially hit. Older patients may also be
overrepresented in Italy because of the average age of the country, the
fact that the virus initially hit villages and small towns and that the
widespread practice of children living with parents long into adulthood.
In contrast, with mass testing in South Korea, it becomes possible to
treat a lot of symptomatic cases early and minimize complications like
pneumonia.
This
does not, however, imply that we cannot use the evolution of the number
of deaths to try to infer the evolution of the infection’s spread and
whether it remains the same in the baseline scenario without
intervention.
In
this regard, there is perhaps no better example than the Italian region
Lombardy. Based on the fact that the first death there occurred on 22
February, this means that the outbreak there had probably started in
late January. The reason for this is that it probably takes at least 20
days from the day of infection for someone to die, and probably 24 in
the median case (6-day median incubation period plus 18 days from the
start of symptoms to death).
It
had been developing silently for more than three weeks and three weeks
have passed since the end of the silent period. If the epidemiological
models are right, then the average rate of growth of deaths per day
corresponding to the silent period should show no clear trend. But that
is not what the data from Lombardy reveal.
Fig. 1
In
Fig. 1, only the last several data points relate to the period when
active suppression measures were taken against the outbreak. The strict
quarantine of the initially hit communes, or “red zones,” in Italy (11
of 12 of them in Lombardy) was instituted just two days after the
discovery of the epidemic, on February 23. If we add 20 days of the
minimum time from infection to death, the first day on which we might
see any impact of the quarantine is March 14.
The
data clearly suggest that the spread had been trending down
significantly even before the initial lockdown. They invalidate the
fundamental assumption of the Covid-19 epidemiological models and with
it, probably also the rationale for the harshest measures of
suppression.."
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